Maricopa Community Colleges  BIO212AB   20016-99999 
Official Course Description: MCCCD Approval: 06/26/01
BIO212AB 20016-99999 LEC
LAB
5 Credit(s)
0 Credit(s)
3 Period(s)
6 Period(s)
Biotechnology II
Intensive introduction to biotechnology, including protein biochemistry, techniques for handling and purifying proteins, recombinant deoxyribonucleic acid (DNA), sequencing deoxyribonucleic acid (DNA), testing deoxyribonucleic acid (DNA) fragments for promoter activity and analysis of deoxyribonucleic acid (DNA) for open reading frames, promoters, and homology. Prerequisites: BIO212AA
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MCCCD Official Course Competencies:
 
BIO212AB   20016-99999 Biotechnology II
1. Explain microbial products and the uses of microbes in biotechnology. (I)
2. Explain the genetics of lambda phage by describing antitermination and autogenous lysogeny. (II)
3. Describe DNA-binding proteins and the significance of the helix-turn-helix motif. (II)
4. Explain the processes of protein synthesis, localization, and degradation. (III)
5. Describe the significance of signal peptides. (III)
6. Describe gene expression, and apply this concept to the expression of a hypothetical gene using the operon, regulon, sigma, and rho. (IV)
7. Explain basic enzymology through rate calculations and description of different types of inhibitors. (V)
8. Explain DNA replication. (V)
9. Explain PCR by applying the technique to generate DNA template for sequencing. (VI)
10. Conduct a homology search between student-prepared DNA and protein sequences and sequences cataloged in the database. (VI)
11. Describe the use of lacZ and phoA in biotechnology. (VII)
12. Perform enzyme assays. (VII)
13. Select a transformant that exhibits especially high expression of ?-galactosidase. (VII)
14. Describe several different purification protocols. (VIII)
15. Explain chromatography. (VIII)
16. Purify ?-galactosidase using ammonia sulfate precipitation, gel filtration chromatography and ion exchange chromatography. (VIII)
17. Follow purification steps with SDS-Polyacrylamide gel electrophoresis and protein assays. (VIII)
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MCCCD Official Course Outline:
 
BIO212AB   20016-99999 Biotechnology II
    I. Microbial Biotechnology
        A. Commercial production of microorganisms
        B. Bioconversions
        C. Products from microorganisms
        D. Microorganisms and the future of biotechnology
      II. Phage Strategies
          A. Lambda lytic cascade and antitermination
          B. Lysogeny
          C. Delicate balance between lysogenic and lysis
          D. DNA-binding proteins
          E. Helix-turn-helix motif
        III. Proteins
            A. Physical characteristics
            B. Messenger RNA, protein synthesis, and use of the genetic code
            C. Protein localization
            D. Signal peptides
            E. Protein degradation
          IV. Transcription
              A. Promoter recognition
              B. Sigma and rho
              C. The operon
              D. The regulon
            V. Basic Enzymology
                A. Physical characteristics of the catalyst
                B. Fundamental importance of enzymes
                C. Reaction rates
                D. Competitive, non-competitive, and uncompetitive inhibitors of enzyme activity
                E. The replicon
                F. The polymerase chain reaction: in vitro replication
              VI. DNA Profiling
                  A. Satellite DNA
                  B. Multi-locus minisatellite VNTRs
                  C. Single-locus minisatellite VNTRs
                  D. Restriction fragment length polymorphisms (RFLPs)
                  E. Digital DNA typing
                  F. Population comparisons
                  G. The Frye test
                  H. DNA sequencing
                  I. DNA databases
                VII. Expression from a Reporter Gene in E. coli
                    A. lacZ and ?-galactosidase
                    B. phoA and phosphataseA
                    C. Enzyme specific selective media
                    D. Enzyme assays in general and ?-galactosidase and phosphotase specifically
                    E. Comparing promoter strength in different hosts
                  VIII. Protein Biochemistry
                      A. Physical characteristics and purification schemes
                      B. Chromatography
                      C. Ammonium sulfate precipitation
                      D. Gel filtration chromatography
                      E. Ion exchange chromatography
                      F. SDS-PAGE
                      G. Protein assays: Biuret, Bradford, and others
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